chemaxon.marvin.applet

Class JMView

java.lang.Object

java.awt.Component

java.awt.Container

java.awt.Panel

java.applet.Applet

javax.swing.JApplet

chemaxon.marvin.applet.AbstractMarvinApplet

chemaxon.marvin.applet.JMView

All Implemented Interfaces:

chemaxon.marvin.applet.JMViewIface, chemaxon.marvin.applet.MAppletIface, MouseListener, ImageObserver, MenuContainer, PropertyChangeListener, Serializable, EventListener, Accessible, RootPaneContainer

public class JMView
extends AbstractMarvinApplet
implements chemaxon.marvin.applet.JMViewIface

Swing version of the MarvinView Applet.

Since:

Marvin 2.0

Version:

5.3, 11/08/2009

Author:

Peter Csizmadia, Tamas Vertse, Nora Mate, Zsolt Mohacsi, Istvan Fajth

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class javax.swing.JApplet

JApplet.AccessibleJApplet

Nested classes/interfaces inherited from class java.applet.Applet

Applet.AccessibleApplet

Nested classes/interfaces inherited from class java.awt.Panel

Panel.AccessibleAWTPanel

Nested classes/interfaces inherited from class java.awt.Container

Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Field Summary

Fields inherited from class chemaxon.marvin.applet.AbstractMarvinApplet

debug, panel

Fields inherited from class javax.swing.JApplet

accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

Constructors

Constructor and Description
JMView()

Method Summary

Methods

Modifier and Type	Method and Description
void	addMol(String s)
void	addMol(String s, String opts)
void	animate(String arg)
protected void	createGUI()
String	evaluateChemicalTerms(String expression, int n)
protected String	evaluateChemicalTerms0(String expression, chemaxon.struc.Molecule mol)
String	getAtomAlias(int n, int i)
int	getAtomCount(int i)
String	getAtomExtraLabel(int n, int i)
double	getBestTabScale()
double	getBestTabScale(int i)
boolean	getC(int i)
int	getCellCount()
String	getL(int i)
String	getM(int n, String fmt)
String	getMImage(int n, String fmt)
double	getMolExactMass(int n)
String	getMolFormula(int n)
double	getMolMass(int n)
String	getMProperty(int n, String key)
int	getMPropertyCount(int n)
String	getMPropertyKey(int n, int i)
protected chemaxon.marvin.view.swing.ViewPanel	getPanel()
int	getSelectedIndex()
String	getT(int i)
double	getTabScale(int i)
boolean	hasValenceError(int i)
boolean	isAtomSetVisible(int id)
boolean	isEmpty(int n)
boolean	isSelected(int i, int atom)
void	mouseClicked(MouseEvent e) Does nothing.
boolean	selectAllAtoms(int i, boolean v)
boolean	selectAtom(int i, int atom, boolean v)
void	setActionB(int i, String s)
void	setActionC(int i, boolean c, String s)
void	setAtomAlias(int n, int i, String alias)
void	setAtomExtraLabel(int n, int i, String label)
void	setAtomSetColor(int i, int rgb)
boolean	setAtomSetSeq(int i, int atom, int id)
void	setAtomSetVisible(int id, boolean v)
void	setBondSetColor(int i, int rgb)
boolean	setBondSetSeq(int i, int j1, int j2, int id)
boolean	setBondSetSeqAll(int i, int id)
void	setC(int i, boolean s)
void	setL(int i, String s)
void	setM(int n, String s)
void	setM(int n, String s, String opts)
void	setMol(String s)
void	setMol(String s, String opts)
void	setMProperty(int n, String key, String value)
void	setSelectedIndex(int i)
void	setT(int i, String s)
void	start() Starts the applet.
void	stop() Stops the applet.

Methods inherited from class chemaxon.marvin.applet.AbstractMarvinApplet

destroy, enqueueForPrivilegedProcessing, getAppletInBrowser, getAppletInfo, getCodeBase, getParameter, getSettingsForApplet, init, isChemicalTermsExpressionSyntaxError, mouseEntered, mouseExited, mousePressed, mouseReleased, propertyChange, setPanel, setParentApplet, validateMoleculeStr, validateMoleculeStr

Methods inherited from class javax.swing.JApplet

addImpl, createRootPane, getAccessibleContext, getContentPane, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isRootPaneCheckingEnabled, paramString, remove, repaint, setContentPane, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.applet.Applet

getAppletContext, getAudioClip, getAudioClip, getDocumentBase, getImage, getImage, getLocale, getParameterInfo, isActive, isValidateRoot, newAudioClip, play, play, resize, resize, setStub, showStatus

Methods inherited from class java.awt.Panel

addNotify

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getInsets, getLayout, getListeners, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paint, paintComponents, preferredSize, print, printComponents, processContainerEvent, processEvent, remove, removeAll, removeContainerListener, removeNotify, setComponentZOrder, setFocusCycleRoot, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getToolkit, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isOpaque, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, reshape, revalidate, setBackground, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setLocation, setLocation, setMaximumSize, setMinimumSize, setName, setPreferredSize, setSize, setSize, setVisible, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface chemaxon.marvin.applet.MAppletIface

isChemicalTermsExpressionSyntaxError, setParentApplet, validateMoleculeStr, validateMoleculeStr

Constructor Detail

JMView

public JMView()

Method Detail

createGUI

protected void createGUI()

Specified by:

createGUI in class AbstractMarvinApplet

getPanel

protected chemaxon.marvin.view.swing.ViewPanel getPanel()

Specified by:

getPanel in class AbstractMarvinApplet

mouseClicked

public void mouseClicked(MouseEvent e)

Does nothing. @param ev the event object

Specified by:

mouseClicked in interface MouseListener

Overrides:

mouseClicked in class AbstractMarvinApplet

stop

public void stop()

Stops the applet.

Overrides:

stop in class AbstractMarvinApplet

start

public void start()

Description copied from class: AbstractMarvinApplet

Starts the applet.

Overrides:

start in class AbstractMarvinApplet

animate

public void animate(String arg)

Specified by:

animate in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.0, 12/26/2002

isEmpty

public boolean isEmpty(int n)

Specified by:

isEmpty in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.5.1

getM

public String getM(int n,
          String fmt)

Specified by:

getM in interface chemaxon.marvin.applet.JMViewIface

getMImage

public String getMImage(int n,
               String fmt)

Specified by:

getMImage in interface chemaxon.marvin.applet.JMViewIface

getMProperty

public String getMProperty(int n,
                  String key)

Specified by:

getMProperty in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.4.1

setMProperty

public void setMProperty(int n,
                String key,
                String value)

Specified by:

setMProperty in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.4.1

getMPropertyCount

public int getMPropertyCount(int n)

Specified by:

getMPropertyCount in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.5

getMPropertyKey

public String getMPropertyKey(int n,
                     int i)

Specified by:

getMPropertyKey in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.5

setAtomAlias

public void setAtomAlias(int n,
                int i,
                String alias)

Specified by:

setAtomAlias in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.5

getAtomAlias

public String getAtomAlias(int n,
                  int i)

Specified by:

getAtomAlias in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.5

setAtomExtraLabel

public void setAtomExtraLabel(int n,
                     int i,
                     String label)

Specified by:

setAtomExtraLabel in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.5

getAtomExtraLabel

public String getAtomExtraLabel(int n,
                       int i)

Specified by:

getAtomExtraLabel in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.5

getMolMass

public double getMolMass(int n)

Specified by:

getMolMass in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 4.0.2

getMolExactMass

public double getMolExactMass(int n)

Specified by:

getMolExactMass in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 4.0.2

getMolFormula

public String getMolFormula(int n)

Specified by:

getMolFormula in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 4.0.2

evaluateChemicalTerms

public String evaluateChemicalTerms(String expression,
                           int n)

Specified by:

evaluateChemicalTerms in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 5.1

evaluateChemicalTerms0

protected String evaluateChemicalTerms0(String expression,
                            chemaxon.struc.Molecule mol)

Overrides:

evaluateChemicalTerms0 in class AbstractMarvinApplet

addMol

public void addMol(String s)

Specified by:

addMol in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.4.1, 07/16/2004

addMol

public void addMol(String s,
          String opts)

Specified by:

addMol in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.4.1, 07/16/2004

setMol

public void setMol(String s)

Specified by:

setMol in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.4.1, 07/08/2004

setMol

public void setMol(String s,
          String opts)

Specified by:

setMol in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.4.1, 07/08/2004

setM

public void setM(int n,
        String s)

Specified by:

setM in interface chemaxon.marvin.applet.JMViewIface

setM

public void setM(int n,
        String s,
        String opts)

Specified by:

setM in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.3

getL

public String getL(int i)

Specified by:

getL in interface chemaxon.marvin.applet.JMViewIface

setL

public void setL(int i,
        String s)

Specified by:

setL in interface chemaxon.marvin.applet.JMViewIface

getC

public boolean getC(int i)

Specified by:

getC in interface chemaxon.marvin.applet.JMViewIface

setC

public void setC(int i,
        boolean s)

Specified by:

setC in interface chemaxon.marvin.applet.JMViewIface

setActionB

public void setActionB(int i,
              String s)

Specified by:

setActionB in interface chemaxon.marvin.applet.JMViewIface

setActionC

public void setActionC(int i,
              boolean c,
              String s)

Specified by:

setActionC in interface chemaxon.marvin.applet.JMViewIface

getT

public String getT(int i)

Specified by:

getT in interface chemaxon.marvin.applet.JMViewIface

setT

public void setT(int i,
        String s)

Specified by:

setT in interface chemaxon.marvin.applet.JMViewIface

getCellCount

public int getCellCount()

Specified by:

getCellCount in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.1.1

getSelectedIndex

public int getSelectedIndex()

Specified by:

getSelectedIndex in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.1

setSelectedIndex

public void setSelectedIndex(int i)

Specified by:

setSelectedIndex in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.2

getAtomCount

public int getAtomCount(int i)

Specified by:

getAtomCount in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.6

selectAllAtoms

public boolean selectAllAtoms(int i,
                     boolean v)

Specified by:

selectAllAtoms in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.6

selectAtom

public boolean selectAtom(int i,
                 int atom,
                 boolean v)

Specified by:

selectAtom in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.6

isSelected

public boolean isSelected(int i,
                 int atom)

Specified by:

isSelected in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.6

isAtomSetVisible

public boolean isAtomSetVisible(int id)

Specified by:

isAtomSetVisible in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.3

setAtomSetVisible

public void setAtomSetVisible(int id,
                     boolean v)

Specified by:

setAtomSetVisible in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.3

setAtomSetColor

public void setAtomSetColor(int i,
                   int rgb)

Specified by:

setAtomSetColor in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.3

setAtomSetSeq

public boolean setAtomSetSeq(int i,
                    int atom,
                    int id)

Specified by:

setAtomSetSeq in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.3

setBondSetColor

public void setBondSetColor(int i,
                   int rgb)

Specified by:

setBondSetColor in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.3

setBondSetSeq

public boolean setBondSetSeq(int i,
                    int j1,
                    int j2,
                    int id)

Specified by:

setBondSetSeq in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.3

setBondSetSeqAll

public boolean setBondSetSeqAll(int i,
                       int id)

Specified by:

setBondSetSeqAll in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 3.3

getTabScale

public double getTabScale(int i)

Specified by:

getTabScale in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.9.2

getBestTabScale

public double getBestTabScale(int i)

Specified by:

getBestTabScale in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.9.2

getBestTabScale

public double getBestTabScale()

Specified by:

getBestTabScale in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 2.9.2

hasValenceError

public boolean hasValenceError(int i)

Specified by:

hasValenceError in interface chemaxon.marvin.applet.JMViewIface

Since:

Marvin 4.1.3 11/13/2006