ReactionProcessor: SMIRKS Based Product Library Generation
Tools
Babel
Mass2Structure
MolInfo
MSFragment
Pattern Count Screen
Pattern Match Counter
Smi2Depict
Reaction Processor
AquaSol
Applications
Chemical Search
COSMOS
Reaction Explorer
Reaction Predictor
Virtual Chemical Space
Home
ReactionProcessor
Reactant & SMIRKS
Reactant Format
SMI - SMILES, Absolute
CAN - Canonical SMILES
ISM - Isomeric SMILES
SDF - MDL SD File
MDL - MDL Mol File
MOL2 - Tripos Sybyl mol2 file
MOL2H - Sybyl mol2 with explicit hydrogens
PDB - Protein Databank PDB file
BIN - Old Style OEBinary
MF - Molecular Formula (Hill order)
XYZ - XMol XYZ format
FASTA - FASTA protein sequence
MOPAC - MOPAC file format(s)
OEB - New Style OpenEye OEBinary
Product Format
SMI - SMILES, Absolute
CAN - Canonical SMILES
ISM - Isomeric SMILES
SDF - MDL SD File
MDL - MDL Mol File
MOL2 - Tripos Sybyl mol2 file
MOL2H - Sybyl mol2 with explicit hydrogens
PDB - Protein Databank PDB file
BIN - Old Style OEBinary
MF - Molecular Formula (Hill order)
XYZ - XMol XYZ format
FASTA - FASTA protein sequence
MOPAC - MOPAC file format(s)
OEB - New Style OpenEye OEBinary
Reactants
Sketch
CCC(C)=O Butanone CN Methamine c1ccccc1C(=O)O Benzoic acid C1CCCC1[N+]#[C-] Isonitrile NC(Cc1ccccc1)C(=O)O Phenylalanine NC(CO)C(=O)O Serine
SMIRKS
[#1,#6:11][C:1](=[O:2])[#1,#6:12].[!$(C=O):13][N:3]([H:4])[H:5].[*:14][C:6](=[O:7])[O:8][H:9].[*:15][N+:10]#[C-:20]>>[*:14][C:6](=[O:7])[N:3]([!$(C=O):13])[C:1]([#1,#6:11])([#1,#6:12])[C+0:20](=[O:8])[N+0:10]([H:9])[*:15].[O:2]([H:4])[H:5] Ugi4Components [O:1]=[C:2][O:3][H:7].[H:8][N:4][H:5]>>[O:1]=[C:2][N:4][H:8].[H:7][O:3][H:5] Amide_Formation [O:1]=[C:2][O:3][H:6].[H:8][O:7][C:4][H:5]>>[O:1]=[C:2][O:3][C:4][H:5].[H:6][O:7][H:8] Ester_Formation [C:1]=[C:2].[C:3]=[C:4][C:5]=[C:6]>>[C:1]1[C:2][C:3][C:4]=[C:5][C:6]1 Diels-Alder [C:1]=[C:2][C:3](=[O:4])[C:5]([H:6])[H:7].[H:11][C:8][C:9]=[O:10]>>[C:1]1[C:2]([H:11])[C:3](=[O:4])[C:5]=[C:9][C:8]1.[H:6][O:10][H:7] Robinson_Annulation [C;$(*([#1,#6])[#1,#6]):1]=[O:2].[H:3][C:4]([H:5])[C:6]=[O:7]>>[C:1]=[C:4][C:6]=[O:7].[H:3][O:2][H:5] Aldol_Condensation ([Br,Cl,F,I:1][C:2](=[O:3]).[O,N:4][H:5])>>[C:2](=[O:3])[O,N:4].[Br:1][H:5] Internal_Nucleophilic_Acylation ([Br,Cl,F,I:1][C:2][H:5].[O,N:3][H:4])>>[O,N:3][C:2][H:5].[Br:1][H:4] Internal_SN2_Cyclization [O:1]=[C:2][CX4;!H1:3][H:4].[O:5]=[C:6][H:7]>>[O:1]=[C:2][CX4;!H0:3][C:6]([O:5][H:4])[H:7] Aldol_Addition [O,N:1]=[C:2][CX4;!H1:3][H:4].[CX4;!H0:5][Cl,Br,I,+300:6]>>[O,N:1]=[C:2][CX4;!H0:3][CX4;!H0:5].[H:4][Cl,Br,I,+300:6] Enolate_Substitution
Options
Include Reactants
Unique Results Only
Generate Products
Generated Products (SMILES)
View Structures
Prepare for DB Input
Formatted for DB Input
Sorry, this feature is only available when the
Product Format
is SMILES.